STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPT2Carnitine palmitoyltransferase 2. (658 aa)    
Predicted Functional Partners:
ACADVL
acyl-CoA dehydrogenase very long chain.
   
 0.988
ACADM
acyl-CoA dehydrogenase medium chain.
   
 0.975
ACADL
acyl-CoA dehydrogenase long chain.
   
 0.971
ACAD9
acyl-CoA dehydrogenase family member 9.
   
 0.965
SLC25A20
Solute carrier family 25 member 20.
   
  
 0.950
PDHA1
Pyruvate dehydrogenase E1 alpha 1 subunit.
    
 
 0.947
ACOX3
acyl-CoA oxidase 3, pristanoyl.
   
 0.947
ENSCWAP00000000171
annotation not available
   
 0.929
ENSCWAP00000027481
annotation not available
   
 0.929
CPT1A
Carnitine palmitoyltransferase 1A.
   
 
 0.906
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.