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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFP90ZFP90 zinc finger protein. (634 aa)    
Predicted Functional Partners:
MTPN
Myotrophin.
    
 
 0.722
TRIM28
Tripartite motif containing 28.
    
 0.682
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.655
TRIM33
Tripartite motif containing 33.
    
  0.654
TRIM24
Tripartite motif containing 24.
    
  0.632
HNF1A
HNF1 homeobox A.
      
 0.588
BPTF
Bromodomain PHD finger transcription factor.
    
 
 0.578
ANKRD6
Ankyrin repeat domain 6.
    
 
 0.575
TLE2
TLE family member 2, transcriptional corepressor.
    
 
 0.540
JAZF1
JAZF zinc finger 1.
      
 0.519
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.