STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFP90ZFP90 zinc finger protein. (634 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 0.886
SCIN
Scinderin.
    
 
 0.803
CHD9
Chromodomain helicase DNA binding protein 9.
    
 
 0.764
TRIM33
Tripartite motif containing 33.
    
  0.741
TRIM24
Tripartite motif containing 24.
    
  0.678
HDHD3
Haloacid dehalogenase like hydrolase domain containing 3.
      
 0.668
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.629
SLC36A4
Solute carrier family 36 member 4.
      
 0.619
ALPK2
Alpha kinase 2.
      
 0.603
GRINA
Glutamate ionotropic receptor NMDA type subunit associated protein 1.
      
 0.603
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.