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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS20ADAM metallopeptidase with thrombospondin type 1 motif 20. (1915 aa)    
Predicted Functional Partners:
POFUT2
Protein O-fucosyltransferase 2.
     
 0.811
TSR3
TSR3 ribosome maturation factor.
      
 0.688
EXOC3L4
Exocyst complex component 3 like 4.
      
 0.631
ENSCWAP00000018469
annotation not available
      
 0.595
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.579
ENSCWAP00000002440
annotation not available
      
 0.566
ENSCWAP00000010031
annotation not available
      
 0.566
ILRUN
Inflammation and lipid regulator with UBA-like and NBR1-like domains.
      
 0.554
UBAP2
Ubiquitin associated protein 2.
   
  
 0.553
KPRP
Keratinocyte proline rich protein.
      
 0.545
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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