STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIMT1DIMT1 rRNA methyltransferase and ribosome maturation factor. (313 aa)    
Predicted Functional Partners:
TSR1
TSR1 ribosome maturation factor.
   
 
 0.995
BYSL
Bystin like.
   
 
 0.992
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 
 0.987
ENSCWAP00000001437
annotation not available
   
 
 0.986
ENSCWAP00000028571
annotation not available
   
 
 0.983
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.981
RCL1
RNA terminal phosphate cyclase like 1.
   
 
 0.981
FCF1
FCF1 rRNA-processing protein.
   
 
 0.978
WDR36
WD repeat domain 36.
   
   0.977
NOC4L
Nucleolar complex associated 4 homolog.
   
 
 0.977
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.