Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TP53I13Tumor protein p53 inducible protein 13. (390 aa)    
Predicted Functional Partners:
MRPL17
Mitochondrial ribosomal protein L17.
   
 
 0.982
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.982
MRPS12
Mitochondrial ribosomal protein S12.
   
 
 0.976
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.974
MRPL43
Mitochondrial ribosomal protein L43.
   
 
 0.973
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.973
MRPS16
Mitochondrial ribosomal protein S16.
   
   0.972
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.971
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.967
MRPS25
Mitochondrial ribosomal protein S25.
   
 
 0.966
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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