STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TP53BP1Tumor protein p53 binding protein 1. (1930 aa)    
Predicted Functional Partners:
BRCA1
BRCA1 DNA repair associated.
    
 0.997
ATM
ATM serine/threonine kinase.
    
 0.996
RNF168
Ring finger protein 168.
    
 0.995
CHEK2
Checkpoint kinase 2.
    
 0.991
NBN
Nibrin.
    
 0.990
ATR
ATR serine/threonine kinase.
    
 0.990
XRCC6
X-ray repair cross complementing 6.
    
 0.986
MRE11
MRE11 homolog, double strand break repair nuclease.
    
 0.979
TP53
Tumor protein p53.
    
 
 0.979
USP28
Ubiquitin specific peptidase 28.
   
 
 0.978
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.