STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFP82ZFP82 zinc finger protein. (524 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.629
PLPP4
Phospholipid phosphatase 4.
    
 0.529
ATM
ATM serine/threonine kinase.
    
 0.515
GART
annotation not available
     
  0.503
SUFU
SUFU negative regulator of hedgehog signaling.
    
 0.485
CCDC24
Coiled-coil domain containing 24.
      
 0.483
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.473
ARID4B
AT-rich interaction domain 4B.
    
 0.455
HS3ST6
Heparan sulfate-glucosamine 3-sulfotransferase 6.
      
 0.449
PPP4R4
Protein phosphatase 4 regulatory subunit 4.
    
 
 0.446
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.