Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDH3Cadherin 3. (829 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.996
JUP
Junction plakoglobin.
   
 0.993
CTNND1
Catenin delta 1.
   
 0.992
CTNNA1
Catenin alpha 1.
    
 0.975
CTNNA2
Catenin alpha 2.
    
 0.974
MDM2
MDM2 proto-oncogene.
    
 0.969
ARVCF
ARVCF delta catenin family member.
    
 0.963
VCL
Vinculin.
   
 0.954
CTNNA3
Catenin alpha 3.
    
 0.946
ENSCWAP00000018024
annotation not available
    
 0.943
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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