close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBP4Latent transforming growth factor beta binding protein 4. (1624 aa)    
Predicted Functional Partners:
TGFB1
Transforming growth factor beta 1.
   
 0.984
TGFB2
Transforming growth factor beta 2.
    
 0.800
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.715
TGFB3
Transforming growth factor beta 3.
   
 0.695
ARID4B
AT-rich interaction domain 4B.
    
 0.664
SLC2A10
Solute carrier family 2 member 10.
    
 
 0.661
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.655
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.655
VWA1
Von Willebrand factor A domain containing 1.
   
 
 0.654
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.647
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: medium (44%) [HD]