STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF260Zinc finger protein 260. (411 aa)    
Predicted Functional Partners:
SNX14
Sorting nexin 14.
      
 0.719
SLC6A13
Solute carrier family 6 member 13.
      
 0.679
NLE1
Notchless homolog 1.
      
 0.658
SRPRB
SRP receptor subunit beta.
      
 0.636
SRPK2
SRSF protein kinase 2.
    
 
 0.621
TOX2
TOX high mobility group box family member 2.
    
 
 0.620
ZMAT1
Zinc finger matrin-type 1.
      
 0.618
SUFU
SUFU negative regulator of hedgehog signaling.
   
  0.521
CARHSP1
Calcium regulated heat stable protein 1.
    
 
 0.518
KDM6A
Lysine demethylase 6A.
   
 0.497
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.