STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAP1AMicrotubule associated protein 1A. (2809 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4.
   
 
 0.946
MAP1B
Microtubule associated protein 1B.
   
 0.917
MAP1S
Microtubule associated protein 1S.
     
  0.890
MAPT
Microtubule associated protein tau.
    
 
 0.883
SQSTM1
Sequestosome 1.
   
 
 0.869
ATG7
Autophagy related 7.
      
 0.836
ATG12
Autophagy related 12.
    
 
 0.833
ENSCWAP00000006794
annotation not available
    
 
 0.817
TARDBP
TAR DNA binding protein.
    
 
 0.817
ENSCWAP00000013840
annotation not available
    
 
 0.817
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.