STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IQUBIQ motif and ubiquitin domain containing. (789 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.982
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.980
C4orf47
Chromosome 4 open reading frame 47.
   
 
 0.977
RSPH14
Radial spoke head 14 homolog.
   
 0.962
C5orf49
Chromosome 5 open reading frame 49.
    
 
 0.954
RSPH3
Radial spoke head 3.
   
 
 0.949
RSPH1
Radial spoke head component 1.
   
 0.948
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.946
IQCD
IQ motif containing D.
   
 
 0.946
SPA17
Sperm autoantigenic protein 17.
   
 
 0.945
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.