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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQUBIQ motif and ubiquitin domain containing. (789 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.925
ARMC3
Armadillo repeat containing 3.
   
 
 0.907
C4orf47
Chromosome 4 open reading frame 47.
      
 0.892
C9orf116
Chromosome 9 open reading frame 116.
      
 0.891
ANKRD42
Ankyrin repeat domain 42.
   
   0.881
ARMC4
Armadillo repeat containing 4.
  
 
 0.818
MED31
Mediator complex subunit 31.
    
  0.775
MED7
Mediator complex subunit 7.
    
  0.766
MED14
Mediator complex subunit 14.
    
  0.766
ENSCWAP00000019777
annotation not available
    
 0.764
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.