STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM6Zinc finger SWIM-type containing 6. (1207 aa)    
Predicted Functional Partners:
ELOC
Elongin C.
    
 0.757
CUL2
Cullin 2.
     
 0.714
ZSWIM9
Zinc finger SWIM-type containing 9.
      
 0.597
RBX1
Ring-box 1.
     
  0.594
ZSWIM8
Zinc finger SWIM-type containing 8.
     
0.572
SP9
Sp9 transcription factor.
      
 0.565
CIART
Circadian associated repressor of transcription.
      
 0.555
ZSWIM4
Zinc finger SWIM-type containing 4.
  
  
 
0.547
ZER1
Zyg-11 related cell cycle regulator.
     
 0.547
APPBP2
Amyloid beta precursor protein binding protein 2.
   
 
  0.546
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.