Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LYRM7LYR motif containing 7. (104 aa)    
Predicted Functional Partners:
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
    
 0.998
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
    
 
 0.930
ENSCWAP00000027383
annotation not available
   
 0.877
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.869
ENSCWAP00000012587
annotation not available
   
 
 0.867
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.862
ENSCWAP00000026989
annotation not available
    
   0.857
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.853
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.853
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.838
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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