Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NTNG1Netrin G1. (543 aa)    
Predicted Functional Partners:
LRRC4C
Leucine rich repeat containing 4C.
    
 0.990
VASN
Vasorin.
    
 0.975
LRRC4B
Leucine rich repeat containing 4B.
    
 0.975
LRRC4
Leucine rich repeat containing 4.
    
 0.966
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
 0.898
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.896
LRRC24
Leucine rich repeat containing 24.
    
 0.863
AMIGO2
Adhesion molecule with Ig like domain 2.
    
 0.863
NTNG2
Netrin G2.
     
  0.837
LRFN4
Leucine rich repeat and fibronectin type III domain containing 4.
    
 0.834
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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