STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004185annotation not available (827 aa)    
Predicted Functional Partners:
MED14
Mediator complex subunit 14.
      
 0.754
PDLIM7
PDZ and LIM domain 7.
     
  0.646
PDLIM5
PDZ and LIM domain 5.
     
  0.646
FAM183A
Family with sequence similarity 183 member A.
      
 0.603
LDB3
LIM domain binding 3.
     
  0.587
ENSCWAP00000010961
annotation not available
      
 0.567
ENSCWAP00000005406
annotation not available
     
  0.559
LIMS2
LIM zinc finger domain containing 2.
     
  0.559
ENSCWAP00000000847
annotation not available
      
 0.556
A4GNT
alpha-1,4-N-acetylglucosaminyltransferase.
      
 0.539
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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