Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDC42SE2CDC42 small effector 2. (84 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.968
TMPRSS5
Transmembrane serine protease 5.
    
   0.830
DNAJC3
DnaJ heat shock protein family (Hsp40) member C3.
   
 0.824
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 0.801
ENSCWAP00000024051
annotation not available
   
 0.801
HYOU1
Hypoxia up-regulated 1.
   
 0.704
CDR2L
Cerebellar degeneration related protein 2 like.
      
 0.686
HSP90B1
Heat shock protein 90 beta family member 1.
  
 0.681
HSPA9
Heat shock protein family A (Hsp70) member 9.
   
 0.668
RHOF
Ras homolog family member F, filopodia associated.
    
 0.652
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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