STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SETD4SET domain containing 4. (440 aa)    
Predicted Functional Partners:
PPP1R10
Protein phosphatase 1 regulatory subunit 10.
    
 
 0.891
ST6GAL2
ST6 beta-galactoside alpha-2,6-sialyltransferase 2.
      
 0.840
SLC5A7
Solute carrier family 5 member 7.
      
 0.837
ENSCWAP00000008454
annotation not available
      
 0.793
SUCLG2
succinate-CoA ligase GDP-forming beta subunit.
   
 0.766
KIAA1958
KIAA1958.
      
 0.754
POLR2B
RNA polymerase II subunit B.
   
 
 0.741
MINDY2
MINDY lysine 48 deubiquitinase 2.
    
 0.725
MINDY1
MINDY lysine 48 deubiquitinase 1.
    
 0.725
MMAA
Metabolism of cobalamin associated A.
    
 0.725
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.