Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IRX3Iroquois homeobox 3. (507 aa)    
Predicted Functional Partners:
IRX5
Iroquois homeobox 5.
   
  
 0.930
IRX2
Iroquois homeobox 2.
   
  
 0.800
ENSCWAP00000018189
annotation not available
      
 0.795
SALL4
Spalt like transcription factor 4.
      
 0.762
ARID4B
AT-rich interaction domain 4B.
    
 
 0.734
TET2
Tet methylcytosine dioxygenase 2.
    
 
 0.702
TSHZ3
Teashirt zinc finger homeobox 3.
    
 0.701
ENSCWAP00000006885
annotation not available
      
 0.701
IRX1
Iroquois homeobox 1.
   
  
 0.695
FAT4
FAT atypical cadherin 4.
      
 0.695
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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