STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMOD2Leiomodin 2. (544 aa)    
Predicted Functional Partners:
LMOD1
Leiomodin 1.
   
 
 0.903
LMOD3
Leiomodin 3.
     
  0.890
KLHL40
Kelch like family member 40.
   
 
 0.811
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.775
MYOZ2
Myozenin 2.
   
 
 0.737
MYL1
Myosin light chain 1.
   
 
 0.723
TNNI2
Troponin I2, fast skeletal type.
   
 
 0.722
KLHL41
Kelch like family member 41.
   
 
 0.706
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 
 0.691
MYL2
Myosin light chain 2.
   
 
 0.654
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.