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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRTFDC1Phosphoribosyl transferase domain containing 1. (225 aa)    
Predicted Functional Partners:
ADSL
Adenylosuccinate lyase.
    
 0.902
MTAP
Methylthioadenosine phosphorylase.
  
 0.892
PNP
Purine nucleoside phosphorylase.
  
 0.886
RRM1
Ribonucleotide reductase catalytic subunit M1.
  
 
 0.873
GART
annotation not available
  
 
 0.867
ATP5F1C
ATP synthase F1 subunit gamma.
     
 0.861
ENSCWAP00000003815
annotation not available
   
 
 0.849
ATP5F1A
ATP synthase F1 subunit alpha.
   
 
 0.849
UPP2
Uridine phosphorylase 2.
    
 0.824
APRT
Adenine phosphoribosyltransferase.
   
 0.824
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.