STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPNS1Calpain small subunit 1. (274 aa)    
Predicted Functional Partners:
CAST
Calpastatin.
    
 0.994
CAPN2
Calpain 2.
   
0.967
CAPN1
Calpain 1.
   
 0.943
ENSCWAP00000010523
annotation not available
 
 
 0.932
CAPN7
Calpain 7.
   
 0.931
ENSCWAP00000000384
annotation not available
   
 0.930
CAPN14
Calpain 14.
   
 0.927
CAPN11
Calpain 11.
   
 0.898
CAPN12
Calpain 12.
   
 0.898
CAPN5
Calpain 5.
   
 0.885
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.