Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DEPDC1BDEP domain containing 1B. (529 aa)    
Predicted Functional Partners:
LRAT
Lecithin retinol acyltransferase.
     
 0.880
NUF2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.877
KIF11
Kinesin family member 11.
   
  
 0.872
RDH10
Retinol dehydrogenase 10.
     
 0.860
DLGAP5
DLG associated protein 5.
   
  
 0.843
PNPLA4
Patatin like phospholipase domain containing 4.
     
 0.820
KIF15
Kinesin family member 15.
   
  
 0.818
HMMR
Hyaluronan mediated motility receptor.
   
  
 0.809
ENSCWAP00000020963
annotation not available
   
  
 0.806
CEP55
Centrosomal protein 55.
   
  
 0.798
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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