STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWDEVon Willebrand factor D and EGF domains. (1545 aa)    
Predicted Functional Partners:
CDC27
Cell division cycle 27.
    
 0.675
NFAT5
Nuclear factor of activated T cells 5.
   
  
 0.658
TGFB1
Transforming growth factor beta 1.
    
 0.641
NCSTN
Nicastrin.
    
 0.625
TEX33
Testis expressed 33.
   
    0.621
ADAM10
ADAM metallopeptidase domain 10.
    
 0.617
THSD7A
Thrombospondin type 1 domain containing 7A.
    
 0.613
CROCC
Ciliary rootlet coiled-coil, rootletin.
    
 
 0.610
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.599
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.599
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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