Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C9Complement C9. (561 aa)    
Predicted Functional Partners:
C6
Complement C6.
   
0.999
C5
Complement C5.
   
 0.999
C8A
Complement C8 alpha chain.
   
0.999
C7
Complement C7.
   
0.995
C8B
Complement C8 beta chain.
   
0.965
ENSCWAP00000029219
annotation not available
    
 0.952
C8G
Complement C8 gamma chain.
   
 0.939
ENSCWAP00000025794
annotation not available
   
 0.881
C3
Complement C3.
   
 0.862
APOE
Apolipoprotein E.
    
 
 0.843
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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