STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM106BTransmembrane protein 106B. (275 aa)    
Predicted Functional Partners:
LMAN2L
Lectin, mannose binding 2 like.
    
 
 0.820
ENSCWAP00000028935
annotation not available
    
   0.818
C9orf72
C9orf72-SMCR8 complex subunit.
      
 0.781
LMAN2
Lectin, mannose binding 2.
    
 
 0.742
PSAP
Prosaposin.
      
 0.734
CHMP2B
Charged multivesicular body protein 2B.
    
 
 0.710
GRN
Granulin precursor.
      
 0.709
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.671
MCRS1
Microspherule protein 1.
    
 0.656
TEX30
Testis expressed 30.
    
 0.648
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.