STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATMINATM interactor. (821 aa)    
Predicted Functional Partners:
UBR5
Ubiquitin protein ligase E3 component n-recognin 5.
    
 
 0.898
ATM
ATM serine/threonine kinase.
    
 0.883
DYNLL1
Dynein light chain LC8-type 1.
    
 
 0.874
DYNLL2
Dynein light chain LC8-type 2.
    
 
 0.853
WRNIP1
WRN helicase interacting protein 1.
    
 
 0.670
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.629
CHEK2
Checkpoint kinase 2.
    
 
 0.608
IARS1
isoleucyl-tRNA synthetase 1.
    
 
 0.509
FIBCD1
Fibrinogen C domain containing 1.
      
 0.507
GART
annotation not available
     
  0.503
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.