STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CERT1Ceramide transporter 1. (624 aa)    
Predicted Functional Partners:
CSNK1G3
Casein kinase 1 gamma 3.
   
 0.923
CSNK1G2
Casein kinase 1 gamma 2.
   
 0.923
CSNK1G1
Casein kinase 1 gamma 1.
    
 0.922
PPP1R35
Protein phosphatase 1 regulatory subunit 35.
      
 0.887
RANGAP1
Ran GTPase activating protein 1.
    
   0.886
MOSPD2
Motile sperm domain containing 2.
    
 
 0.870
NUDCD3
NudC domain containing 3.
      
 0.862
EYA1
EYA transcriptional coactivator and phosphatase 1.
    
 
 0.833
VAPA
VAMP associated protein A.
    
 0.832
RTN3
Reticulon 3.
   
   0.799
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.