STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004417annotation not available (1555 aa)    
Predicted Functional Partners:
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
    
 
 0.964
UBE3A
Ubiquitin protein ligase E3A.
    
 
 0.958
MAPK6
Mitogen-activated protein kinase 6.
    
 
 0.955
CCP110
Centriolar coiled-coil protein 110.
    
 
 0.944
HERC1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
    
 
 0.899
CEP290
Centrosomal protein 290.
    
 
 0.854
LRRC41
Leucine rich repeat containing 41.
     
 0.853
DBNL
Drebrin like.
    
 
 0.837
LAP3
Leucine aminopeptidase 3.
    
 
 0.810
TP53
Tumor protein p53.
    
 
 0.794
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.