STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004417annotation not available (1555 aa)    
Predicted Functional Partners:
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
    
 
 0.905
MAPK6
Mitogen-activated protein kinase 6.
    
 
 0.812
ELP5
Elongator acetyltransferase complex subunit 5.
      
 0.777
CCP110
Centriolar coiled-coil protein 110.
    
 
 0.756
YBX2
Y-box binding protein 2.
      
 0.746
ZNF232
Zinc finger protein 232.
      
 0.739
CEP170
Centrosomal protein 170.
    
 
 0.721
CEP120
Centrosomal protein 120.
    
 
 0.715
USP33
Ubiquitin specific peptidase 33.
    
 
 0.700
HERC1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
    
 
 0.692
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.