STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM3Zinc finger MYM-type containing 3. (1373 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
    
 0.992
GTF2I
General transcription factor IIi.
   
 
 0.973
RCOR1
REST corepressor 1.
    
 
 0.972
ZMYM2
Zinc finger MYM-type containing 2.
   
 
 0.953
ENSCWAP00000026569
annotation not available
   
 
 0.951
ENSCWAP00000026595
annotation not available
   
 
 0.914
ZNF202
Zinc finger protein 202.
    
 
 0.891
HARBI1
Harbinger transposase derived 1.
      
 0.887
HDAC2
Histone deacetylase 2.
    
 
 0.881
HDAC1
Histone deacetylase 1.
    
 
 0.881
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.