STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN4PDZ domain containing ring finger 4. (1044 aa)    
Predicted Functional Partners:
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.894
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.795
ANKRD22
Ankyrin repeat domain 22.
    
 0.792
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.781
BEX5
Brain expressed X-linked 5.
      
 0.754
RNASEL
Ribonuclease L.
    
 0.753
ENSCWAP00000004770
annotation not available
    
 0.740
OIP5
Opa interacting protein 5.
    
   0.737
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.697
ECSIT
ECSIT signaling integrator.
    
 0.697
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.