STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHTF8Chromosome transmission fidelity factor 8. (121 aa)    
Predicted Functional Partners:
DSCC1
DNA replication and sister chromatid cohesion 1.
   
 0.999
CHTF18
Chromosome transmission fidelity factor 18.
   
 0.997
RFC4
Replication factor C subunit 4.
   
 0.994
RFC5
Replication factor C subunit 5.
   
 0.994
RFC3
Replication factor C subunit 3.
   
 0.987
RFC2
Replication factor C subunit 2.
   
 0.985
DDX11
DEAD/H-box helicase 11.
   
 
 0.944
TIMELESS
Timeless circadian regulator.
    
 
 0.941
WDHD1
WD repeat and HMG-box DNA binding protein 1.
   
 
 0.936
TIPIN
TIMELESS interacting protein.
    
 
 0.934
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.