STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GJB1Gap junction protein beta 1. (284 aa)    
Predicted Functional Partners:
GJB6
Gap junction protein beta 6.
  
  
0.890
TGFB1
Transforming growth factor beta 1.
     
 0.840
TGFB2
Transforming growth factor beta 2.
     
  0.838
TGFB3
Transforming growth factor beta 3.
     
  0.837
LRRC32
Leucine rich repeat containing 32.
     
  0.812
PTPN2
Protein tyrosine phosphatase non-receptor type 2.
    
 
 0.787
RNMT
RNA guanine-7 methyltransferase.
      
 0.754
PRX
Periaxin.
      
 0.670
PANX1
Pannexin 1.
      
 0.668
EGR2
Early growth response 2.
    
 
 0.659
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.