Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UTP4UTP4 small subunit processome component. (686 aa)    
Predicted Functional Partners:
WDR36
WD repeat domain 36.
   
 0.999
WDR3
WD repeat domain 3.
   
 0.999
UTP15
UTP15 small subunit processome component.
   
 0.999
WDR75
WD repeat domain 75.
   
 0.999
UTP18
UTP18 small subunit processome component.
   
 0.999
WDR43
WD repeat domain 43.
   
 0.999
HEATR1
HEAT repeat containing 1.
   
 0.999
ENSCWAP00000028571
annotation not available
   
 0.999
WDR46
WD repeat domain 46.
   
 0.998
UTP6
UTP6 small subunit processome component.
   
 0.998
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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