Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC33Tetratricopeptide repeat domain 33. (262 aa)    
Predicted Functional Partners:
WDR61
WD repeat domain 61.
    
  0.955
CCDC97
Coiled-coil domain containing 97.
    
   0.948
PHF5A
PHD finger protein 5A.
    
   0.948
GET3
Guided entry of tail-anchored proteins factor 3, ATPase.
   
 0.929
TCL1A
T cell leukemia/lymphoma 1A.
    
   0.919
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
    
   0.909
SF3B6
Splicing factor 3b subunit 6.
    
   0.896
SEC61B
SEC61 translocon beta subunit.
    
 0.895
GET4
Guided entry of tail-anchored proteins factor 4.
   
 0.875
SF3B2
Splicing factor 3b subunit 2.
    
   0.854
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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