STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCC1GRIP and coiled-coil domain containing 1. (775 aa)    
Predicted Functional Partners:
BYSL
Bystin like.
   
 0.982
TSR1
TSR1 ribosome maturation factor.
   
 0.977
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.971
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.966
ENSCWAP00000001437
annotation not available
   
 0.959
RIOK2
RIO kinase 2.
   
 0.957
AATF
Apoptosis antagonizing transcription factor.
   
 
 0.955
HEATR1
HEAT repeat containing 1.
   
 
 0.955
ENSCWAP00000028571
annotation not available
   
 
 0.955
DIMT1
DIMT1 rRNA methyltransferase and ribosome maturation factor.
   
 
 0.949
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.