STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE4Spectrin repeat containing nuclear envelope family member 4. (370 aa)    
Predicted Functional Partners:
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.999
CCDC155
Coiled-coil domain containing 155.
    
  0.997
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.971
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.923
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
  0.892
SPAG4
Sperm associated antigen 4.
    
 0.842
SUN5
Sad1 and UNC84 domain containing 5.
    
 0.842
MRVI1
Murine retrovirus integration site 1 homolog.
    
  0.749
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
    
  0.749
ENSCWAP00000026568
annotation not available
    
  0.749
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.