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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDHAF1Succinate dehydrogenase complex assembly factor 1. (116 aa)    
Predicted Functional Partners:
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
    
 
 0.944
ENSCWAP00000004776
annotation not available
    
 
 0.854
ENSCWAP00000005264
annotation not available
    
 
 0.771
SDHC
Succinate dehydrogenase complex subunit C.
      
 0.760
ENSCWAP00000004319
annotation not available
      
 0.757
NFU1
NFU1 iron-sulfur cluster scaffold.
      
 0.756
MGARP
Mitochondria localized glutamic acid rich protein.
      
 0.756
SDHAF2
Succinate dehydrogenase complex assembly factor 2.
      
 0.747
LYRM7
LYR motif containing 7.
      
 0.675
EIF2B5
Eukaryotic translation initiation factor 2B subunit epsilon.
      
 0.657
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.