Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDHAF1Succinate dehydrogenase complex assembly factor 1. (116 aa)    
Predicted Functional Partners:
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
    
 0.997
ENSCWAP00000004776
annotation not available
    
 0.988
ENSCWAP00000005264
annotation not available
    
 0.982
NFKBID
NFKB inhibitor delta.
      
 0.887
PRODH2
Proline dehydrogenase 2.
      
 0.869
SDHC
Succinate dehydrogenase complex subunit C.
     
 0.840
ENSCWAP00000004319
annotation not available
     
 0.835
ENSCWAP00000027383
annotation not available
    
 0.799
HLCS
Holocarboxylase synthetase.
      
 0.793
ENSCWAP00000012587
annotation not available
   
 
 0.783
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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