STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSCN3Fascin actin-bundling protein 3. (498 aa)    
Predicted Functional Partners:
TMEM53
Transmembrane protein 53.
     
  0.843
FAM166A
Family with sequence similarity 166 member A.
   
    0.841
SMAD5
SMAD family member 5.
     
  0.810
SMAD9
SMAD family member 9.
     
  0.810
SMAD1
SMAD family member 1.
     
  0.810
TEKT2
Tektin 2.
   
  
 0.805
SPACA1
Sperm acrosome associated 1.
   
  
 0.755
TRIM42
Tripartite motif containing 42.
   
    0.611
GTSF1L
Gametocyte specific factor 1 like.
      
 0.608
SPESP1
Sperm equatorial segment protein 1.
   
  
 0.604
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.