GAN protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GAN

Gigaxonin. (597 aa)

Predicted Functional Partners:

CUL3

0.962

RBX1

0.917

KLHL3

0.904

PEF1

0.904

SPOPL

0.902

KLHL25

0.900

SPOP

0.897

KBTBD8

0.896

KLHL42

0.896

KLHL7

0.894

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL3	GAN	ENSCWAP00000021356	ENSCWAP00000004498	Cullin 3.	Gigaxonin.	0.962
CUL3	KBTBD8	ENSCWAP00000021356	ENSCWAP00000022826	Cullin 3.	Kelch repeat and BTB domain containing 8.	0.980
CUL3	KLHL25	ENSCWAP00000021356	ENSCWAP00000029409	Cullin 3.	Kelch like family member 25.	0.996
CUL3	KLHL3	ENSCWAP00000021356	ENSCWAP00000000296	Cullin 3.	Kelch like family member 3.	0.998
CUL3	KLHL42	ENSCWAP00000021356	ENSCWAP00000022929	Cullin 3.	Kelch like family member 42.	0.992
CUL3	KLHL7	ENSCWAP00000021356	ENSCWAP00000001661	Cullin 3.	Kelch like family member 7.	0.960
CUL3	PEF1	ENSCWAP00000021356	ENSCWAP00000022758	Cullin 3.	penta-EF-hand domain containing 1.	0.960
CUL3	RBX1	ENSCWAP00000021356	ENSCWAP00000016541	Cullin 3.	Ring-box 1.	0.999
CUL3	SPOP	ENSCWAP00000021356	ENSCWAP00000029437	Cullin 3.	Speckle type BTB/POZ protein.	0.999
CUL3	SPOPL	ENSCWAP00000021356	ENSCWAP00000025598	Cullin 3.	Speckle type BTB/POZ protein like.	0.998
GAN	CUL3	ENSCWAP00000004498	ENSCWAP00000021356	Gigaxonin.	Cullin 3.	0.962
GAN	KBTBD8	ENSCWAP00000004498	ENSCWAP00000022826	Gigaxonin.	Kelch repeat and BTB domain containing 8.	0.896
GAN	KLHL25	ENSCWAP00000004498	ENSCWAP00000029409	Gigaxonin.	Kelch like family member 25.	0.900
GAN	KLHL3	ENSCWAP00000004498	ENSCWAP00000000296	Gigaxonin.	Kelch like family member 3.	0.904
GAN	KLHL42	ENSCWAP00000004498	ENSCWAP00000022929	Gigaxonin.	Kelch like family member 42.	0.896
GAN	KLHL7	ENSCWAP00000004498	ENSCWAP00000001661	Gigaxonin.	Kelch like family member 7.	0.894
GAN	PEF1	ENSCWAP00000004498	ENSCWAP00000022758	Gigaxonin.	penta-EF-hand domain containing 1.	0.904
GAN	RBX1	ENSCWAP00000004498	ENSCWAP00000016541	Gigaxonin.	Ring-box 1.	0.917
GAN	SPOP	ENSCWAP00000004498	ENSCWAP00000029437	Gigaxonin.	Speckle type BTB/POZ protein.	0.897
GAN	SPOPL	ENSCWAP00000004498	ENSCWAP00000025598	Gigaxonin.	Speckle type BTB/POZ protein like.	0.902