Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NLGN3Neuroligin 3. (848 aa)    
Predicted Functional Partners:
NRXN2
Neurexin 2.
   
 0.992
NRXN1
Neurexin 1.
   
 0.987
NRXN3
Neurexin 3.
   
 0.979
NLGN2
Neuroligin 2.
   
 0.965
DLG4
Discs large MAGUK scaffold protein 4.
   
 0.962
NLGN1
Neuroligin 1.
   
  0.944
ENSCWAP00000006714
annotation not available
   
  0.942
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.904
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 
 0.901
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
  
 0.876
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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