Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDE4DPhosphodiesterase 4D. (807 aa)    
Predicted Functional Partners:
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
   
 0.965
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
   
 0.965
ADSL
Adenylosuccinate lyase.
     
 0.900
AK3
Adenylate kinase 3.
     
 0.899
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.898
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
     
 0.898
AMPD2
Adenosine monophosphate deaminase 2.
     
 0.898
AMPD1
Adenosine monophosphate deaminase 1.
     
 0.897
APRT
Adenine phosphoribosyltransferase.
     
 0.897
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.896
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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