Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCEA2Transcription elongation factor A2. (299 aa)    
Predicted Functional Partners:
POLR2I
RNA polymerase II subunit I.
   
 0.965
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.963
POLR2E
RNA polymerase II subunit E.
   
 0.953
ENSCWAP00000019010
annotation not available
   
 0.950
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.950
GTF2B
General transcription factor IIB.
   
 0.949
POLR2C
RNA polymerase II subunit C.
   
 0.947
POLR2H
RNA polymerase II subunit H.
   
 0.947
POLR2G
RNA polymerase II subunit G.
    
 0.946
POLR2B
RNA polymerase II subunit B.
   
 0.932
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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