Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LSM11LSM11, U7 small nuclear RNA associated. (359 aa)    
Predicted Functional Partners:
LSM10
LSM10, U7 small nuclear RNA associated.
    
 0.999
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
 0.996
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
    
 0.968
ENSCWAP00000010435
annotation not available
    
 0.965
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 
 0.965
ENSCWAP00000000357
annotation not available
    
 0.957
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
    
 0.957
DDX20
DEAD-box helicase 20.
    
 
 0.954
ENSCWAP00000002119
annotation not available
    
 
 0.939
SYMPK
Symplekin.
    
 
 0.932
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.