STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLKDNA polymerase kappa. (875 aa)    
Predicted Functional Partners:
REV1
REV1 DNA directed polymerase.
   
 0.997
PCNA
Proliferating cell nuclear antigen.
   
 0.985
TP53
Tumor protein p53.
    
  0.922
MAD2L2
Mitotic arrest deficient 2 like 2.
   
 0.911
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
   
 0.900
RAD51
RAD51 recombinase.
  
 0.846
POLD2
DNA polymerase delta 2, accessory subunit.
   
 0.842
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 
 0.842
XPA
XPA, DNA damage recognition and repair factor.
   
 0.836
POLE
DNA polymerase epsilon, catalytic subunit.
   
 0.829
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.