Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004537annotation not available (437 aa)    
Predicted Functional Partners:
VTA1
Vesicle trafficking 1.
   
 0.998
ENSCWAP00000007929
annotation not available
   
 0.998
ENSCWAP00000011838
annotation not available
   
 0.998
CHMP6
Charged multivesicular body protein 6.
    
 0.998
CHMP2A
Charged multivesicular body protein 2A.
    
 0.994
IST1
IST1 factor associated with ESCRT-III.
   
 0.991
CHMP5
Charged multivesicular body protein 5.
   
 0.990
CHMP2B
Charged multivesicular body protein 2B.
   
 0.989
ENSCWAP00000007316
annotation not available
   
 0.988
CHMP4A
Charged multivesicular body protein 4A.
    
 0.972
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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