Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CARD6Caspase recruitment domain family member 6. (898 aa)    
Predicted Functional Partners:
RIPK2
Receptor interacting serine/threonine kinase 2.
    
 0.879
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
    
   0.862
TOM1L2
Target of myb1 like 2 membrane trafficking protein.
    
   0.744
TOM1
Target of myb1 membrane trafficking protein.
    
   0.744
TK1
Thymidine kinase 1.
      
 0.555
MRPS24
Mitochondrial ribosomal protein S24.
   
    0.511
ENSCWAP00000007720
annotation not available
   
    0.496
ENSCWAP00000007793
annotation not available
   
    0.496
HYI
Hydroxypyruvate isomerase (putative).
      
 0.487
TRAF3IP3
TRAF3 interacting protein 3.
      
 0.487
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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