Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHF14PHD finger protein 14. (841 aa)    
Predicted Functional Partners:
HMG20A
High mobility group 20A.
   
 
 0.980
TEX10
Testis expressed 10.
    
   0.896
MACROH2A1
macroH2A.1 histone.
    
   0.836
ENSCWAP00000026569
annotation not available
   
 
 0.810
TCF20
Transcription factor 20.
   
 
 0.792
RAI1
Retinoic acid induced 1.
   
 
 0.728
MACROH2A2
macroH2A.2 histone.
    
   0.694
ZNF404
Zinc finger protein 404.
      
 0.614
ZNF618
Zinc finger protein 618.
      
 0.585
ENSCWAP00000014704
annotation not available
      
 0.582
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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