STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFKBIDNFKB inhibitor delta. (458 aa)    
Predicted Functional Partners:
REL
REL proto-oncogene, NF-kB subunit.
   
 0.968
NFKB2
Nuclear factor kappa B subunit 2.
   
 
 0.956
NFKB1
Nuclear factor kappa B subunit 1.
   
 
 0.948
SDHAF1
Succinate dehydrogenase complex assembly factor 1.
      
 0.887
SS18
SS18 subunit of BAF chromatin remodeling complex.
    
   0.876
RELB
RELB proto-oncogene, NF-kB subunit.
   
 0.860
RELA
RELA proto-oncogene, NF-kB subunit.
   
 0.842
PRODH2
Proline dehydrogenase 2.
      
 0.829
HLCS
Holocarboxylase synthetase.
      
 0.754
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
    
   0.682
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.