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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUT4Terminal uridylyl transferase 4. (1668 aa)    
Predicted Functional Partners:
LIN28A
Lin-28 homolog A.
   
 
 0.828
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
    
 
 0.726
GINM1
Glycoprotein integral membrane 1.
      
 0.684
LIN28B
Lin-28 homolog B.
   
 
 0.684
CXorf38
Chromosome X open reading frame 38.
      
 0.676
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.658
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
    
 
 0.651
PAQR5
Progestin and adipoQ receptor family member 5.
      
 0.650
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 0.649
MEX3D
Mex-3 RNA binding family member D.
      
 0.648
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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