STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TUT4Terminal uridylyl transferase 4. (1668 aa)    
Predicted Functional Partners:
TUT7
Terminal uridylyl transferase 7.
   
 0.969
LIN28A
Lin-28 homolog A.
    
 
 0.966
SPEG
Striated muscle enriched protein kinase.
    
   0.824
PAPOLG
poly(A) polymerase gamma.
   
 
 0.817
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
    
 
 0.771
PAPOLB
poly(A) polymerase beta.
   
 
 0.716
PAPOLA
poly(A) polymerase alpha.
   
 
 0.716
LIN28B
Lin-28 homolog B.
    
 
 0.711
POLR2G
RNA polymerase II subunit G.
    
  0.692
POLR2E
RNA polymerase II subunit E.
    
  0.683
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.